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1

Where the Wild Things Are: Transposable Elements as Drivers of Structural and Functional Variations in the Wheat Genome

Bariah, Inbar, Keidar-Friedman, Danielle, Kashkush, Khalil

Journal:

Frontiers in Plant Science

Year:

2020

File:

PDF, 326 KB

2020

2

Massive alterations of the methylation patterns around DNA transposons in the first four generations of a newly formed wheat allohexaploid

Bell, John, Yaakov, Beery, Kashkush, Khalil

Journal:

Year:

2011

Language:

english

File:

PDF, 1.35 MB

english, 2011

3

Genome-wide impact of transcriptional activation of long terminal repeat retrotransposons on the expression of adjacent host genes

Kashkush, Khalil

Journal:

Israel Journal of Plant Sciences

Year:

2007

Language:

english

File:

PDF, 925 KB

english, 2007

4

The Arab Nurse and the Jewish Psychotic Patient in the Closed Psychiatric Ward

Fennig, S., Tevesess, I., Kashkush, G., Zmiro, G.

Journal:

International Journal of Social Psychiatry

Year:

1992

Language:

english

File:

PDF, 747 KB

english, 1992

5

Immediate Genetic and Epigenetic Changes in F1 Hybrids Parented by Species with Divergent Genomes in the Rice Genus (Oryza)

Wu, Ying, Sun, Yue, Shen, Kun, Sun, Shuai, Wang, Jie, Jiang, Tingting, Cao, Shuai, Josiah, Samuel Manthi, Pang, Jinsong, Lin, Xiuyun, Liu, Bao, Kashkush, Khalil

Journal:

Year:

2015

Language:

english

File:

PDF, 1.78 MB

english, 2015

6

Cultivar identification and genetic map of mango (Mangifera indica)

Khalil Kashkush, Fang Jinggui, Eli Tomer, Jossi Hillel, Uri Lavi

Journal:

Year:

2001

Language:

english

File:

PDF, 133 KB

english, 2001

7

Genome wide characterization of barley NAC transcription factors enables the identification of grain-specific transcription factors exclusive for the Poaceae family of monocotyledonous plants

Murozuka, Emiko, Massange-Sánchez, Julio A., Nielsen, Kasper, Gregersen, Per L., Braumann, Ilka, Kashkush, Khalil

Journal:

Year:

2018

Language:

english

File:

PDF, 3.73 MB

english, 2018

8

Reorganization of specific chromosomal domains and activation of silent genes in plant cells acquiring pluripotentiality

Yigal Avivi, Vered Morad, Hagit Ben-Meir, Jing Zhao, Khalil Kashkush, Tzvi Tzfira, Vitaly Citovsky, Gideon Grafi

Journal:

Developmental Dynamics

Year:

2004

Language:

english

File:

PDF, 829 KB

english, 2004

9

Analysis of copy-number variation, insertional polymorphism, and methylation status of the tiniest class I (TRIM) and class II (MITE) transposable element families in various rice strains

Omer Baruch, Khalil Kashkush

Journal:

Plant Cell Reports

Year:

2012

Language:

english

File:

PDF, 466 KB

english, 2012

10

MOLECULAR MARKERS IN TROPICAL AND SUBTROPICAL HORTICULTURE

Lavi, U., Sharon, D., Mhameed, S., Kashkush, H., Adato, A., Kaufman, D., Cregan, P.B., Lahav, E., Tomer, E., Hillel, J.

Journal:

Acta Horticulturae

Year:

1998

File:

PDF, 390 KB

1998

11

Gene loss, silencing and activation in a newly synthesized wheat allotetraploid

Kashkush, Khalil, Feldman, Moshe, Levy, Avraham a.

Journal:

Year:

2002

Language:

english

File:

PDF, 142 KB

english, 2002

12

Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea

Sampath, Perumal, Murukarthick, Jayakodi, Izzah, Nur Kholilatul, Lee, Jonghoon, Choi, Hong-Il, Shirasawa, Kenta, Choi, Beom-Soon, Liu, Shengyi, Nou, Ill-Sup, Yang, Tae-Jin, Kashkush, Khalil

Journal:

Year:

2014

Language:

english

File:

PDF, 2.48 MB

english, 2014

13

Dynamic Evolution of Rht-1 Homologous Regions in Grass Genomes

Wu, Jing, Kong, Xiuying, Shi, Chao, Gu, Yongqiang, Jin, Cuiyun, Gao, Lizhi, Jia, Jizeng, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 1.68 MB

english, 2013

14

Characterisation and Analysis of the Aegilops sharonensis Transcriptome, a Wild Relative of Wheat in the Sitopsis Section

Bouyioukos, Costas, Moscou, Matthew J., Champouret, Nicolas, Hernández-Pinzón, Inmaculada, Ward, Eric R., Wulff, Brande B. H., Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 2.29 MB

english, 2013

15

The Evolutionary Dynamics of a Novel Miniature Transposable Element in the Wheat Genome

Keidar-Friedman, Danielle, Bariah, Inbar, Domb, Katherine, Kashkush, Khalil

Journal:

Frontiers in Plant Science

Year:

2020

File:

PDF, 1.34 MB

2020

16

Evolution of the BBAA Component of Bread Wheat during Its History at the Allohexaploid Level

Zhang, Huakun, Zhu, Bo, Qi, Bao, Gou, Xiaowan, Dong, Yuzhu, Xu, Chunming, Zhang, Bangjiao, Huang, Wei, Liu, Chang, Wang, Xutong, Yang, Chunwu, Zhou, Hao, Kashkush, Khalil, Feldman, Moshe, Wendel, Jona

Journal:

Year:

2014

Language:

english

File:

PDF, 1.81 MB

english, 2014

17

Genome-wide analysis of a recently active retrotransposon, Au SINE, in wheat: content, distribution within subgenomes and chromosomes, and gene associations

Keidar, Danielle, Doron, Chen, Kashkush, Khalil

Journal:

Plant Cell Reports

Year:

2017

Language:

english

File:

PDF, 1.72 MB

english, 2017

18

Abundant Microsatellite Diversity and Oil Content in Wild Arachis Species

Huang, Li, Jiang, Huifang, Ren, Xiaoping, Chen, Yuning, Xiao, Yingjie, Zhao, Xinyan, Tang, Mei, Huang, Jiaquan, Upadhyaya, Hari D., Liao, Boshou, Kashkush, Khalil

Journal:

Year:

2012

Language:

english

File:

PDF, 1.23 MB

english, 2012

19

Linear Decay of Retrotransposon Antisense Bias across Genes Is Contingent upon Tissue Specificity

Linker, Sara, Hedges, Dale, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 1.34 MB

english, 2013

20

Molecular Analysis and Genomic Organization of Major DNA Satellites in Banana (Musa spp.)

Čížková, Jana, Hřibová, Eva, Humplíková, Lenka, Christelová, Pavla, Suchánková, Pavla, Doležel, Jaroslav, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 2.25 MB

english, 2013

21

Isolation and characterization of a female-specific DNA marker in the giant freshwater prawn Macrobrachium rosenbergii

Ventura, T, Aflalo, E D, Weil, S, Kashkush, K, Sagi, A

Journal:

Year:

2011

Language:

english

File:

PDF, 438 KB

english, 2011

22

Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution

Beery Yaakov, Elif Ceylan, Katherine Domb, Khalil Kashkush

Journal:

Theoretical and Applied Genetics

Year:

2012

Language:

english

File:

PDF, 464 KB

english, 2012

23

Genome-wide analysis of short interspersed nuclear elements SINES revealed high sequence conservation, gene association and retrotranspositional activity in wheat

Ben-David, Smadar, Yaakov, Beery, Kashkush, Khalil

Journal:

The Plant Journal

Year:

2013

Language:

english

File:

PDF, 495 KB

english, 2013

24

Genome-Wide Analysis of Stowaway-Like MITEs in Wheat Reveals High Sequence Conservation, Gene Association, and Genomic Diversification

Yaakov, B., Ben-David, S., Kashkush, K.

Journal:

PLANT PHYSIOLOGY

Year:

2013

Language:

english

File:

PDF, 1.16 MB

english, 2013

25

Transposable elements generate population-specific insertional patterns and allelic variation in genes of wild emmer wheat (Triticum turgidum ssp. dicoccoides)

Domb, Katherine, Keidar, Danielle, Yaakov, Beery, Khasdan, Vadim, Kashkush, Khalil

Journal:

BMC Plant Biology

Year:

2017

Language:

english

File:

PDF, 1.92 MB

english, 2017

26

Genome-wide analyses of miniature inverted-repeat transposable elements reveals new insights into the evolution of the Triticum-Aegilops group

Keidar-Friedman, Danielle, Bariah, Inbar, Kashkush, Khalil, Vandepoele, Klaas

Journal:

Year:

2018

Language:

english

File:

PDF, 4.24 MB

english, 2018

27

Genome-Wide Analysis of Stowaway-Like MITEs in Wheat Reveals High Sequence Conservation, Gene Association, and Genomic Diversification

Beery Yaakov, Smadar Ben-David and Khalil Kashkush

Journal:

PLANT PHYSIOLOGY

Year:

2013

Language:

english

File:

PDF, 2.41 MB

english, 2013

28

A New Class of Wheat Gliadin Genes and Proteins

Anderson, Olin D., Dong, Lingli, Huo, Naxin, Gu, Yong Q., Kashkush, Khalil

Journal:

Year:

2012

Language:

english

File:

PDF, 936 KB

english, 2012

29

Identification and characterization of large-scale genomic rearrangements during wheat evolution

Bariah, Inbar, Keidar-Friedman, Danielle, Kashkush, Khalil, Lustig, Arthur J.

Journal:

Year:

2020

File:

PDF, 1.20 MB

2020

30

Mobilization ofStowaway-like MITEs in newly formed allohexaploid wheat species

Yaakov, Beery, Kashkush, Khalil

Journal:

Plant Molecular Biology

Year:

2012

Language:

english

File:

PDF, 445 KB

english, 2012

31

Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat

Kashkush, Khalil, Feldman, Moshe, Levy, Avraham A.

Journal:

Nature Genetics

Year:

2002

Language:

english

File:

PDF, 326 KB

english, 2002

32

MANGO BREEDING AND THE POTENTIAL OF MODERN BIOLOGY

Lavi, U., Kashkush, K., Sa'ada, D., Shats, H., Ravid, U., Tomer, E.

Journal:

Acta Horticulturae

Year:

2004

Language:

english

File:

PDF, 44 KB

english, 2004

33

Developmental Timing of DNA Elimination Following Allopolyploidization in Wheat

Khasdan, V., Yaakov, B., Kraitshtein, Z., Kashkush, K.

Journal:

Year:

2010

Language:

english

File:

PDF, 1.35 MB

english, 2010

34

Isolation and Characterization of a Psathyrostachys huashanica Keng 6Ns Chromosome Addition in Common Wheat

Du, Wanli, Wang, Jing, Pang, Yuhui, Li, Yanli, Chen, Xinhong, Zhao, Jixin, Yang, Qunhui, Wu, Jun, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 2.11 MB

english, 2013

35

Cytonuclear Coordination Is Not Immediate upon Allopolyploid Formation in Tragopogon miscellus (Asteraceae) Allopolyploids

Sehrish, Tina, Symonds, V. Vaughan, Soltis, Douglas E., Soltis, Pamela S., Tate, Jennifer A., Kashkush, Khalil

Journal:

Year:

2015

Language:

english

File:

PDF, 1.15 MB

english, 2015

36

Genome-Wide Survey and Comparative Analysis of LTR Retrotransposons and Their Captured Genes in Rice and Sorghum

Jiang, Shu-Ye, Ramachandran, Srinivasan, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 1.64 MB

english, 2013

37

Copy number variation of transposable elements inTriticum–Aegilopsgenus suggests evolutionary and revolutionary dynamics following allopolyploidization

Beery Yaakov, Karin Meyer, Smadar Ben-David, Khalil Kashkush

Journal:

Plant Cell Reports

Year:

2013

Language:

english

File:

PDF, 349 KB

english, 2013

38

LTR-Retrotransposons in R. exoculata and Other Crustaceans: The Outstanding Success of GalEa-Like Copia Elements

Piednoël, Mathieu, Donnart, Tifenn, Esnault, Caroline, Graça, Paula, Higuet, Dominique, Bonnivard, Eric, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 1.45 MB

english, 2013

39

A novel miniature transposon-like element discovered in the coding sequence of a gene that encodes for 5-formyltetrahydrofolate in wheat

Domb, Katherine, Keidar-Friedman, Danielle, Kashkush, Khalil

Journal:

BMC Plant Biology

Year:

2019

Language:

english

File:

PDF, 2.02 MB

english, 2019

40

Efficient Induction of Wheat-Agropyron cristatum 6P Translocation Lines and GISH Detection

Song, Liqiang, Jiang, Lili, Han, Haiming, Gao, Ainong, Yang, Xinming, Li, Lihui, Liu, Weihua, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 504 KB

english, 2013

41

Genetic and Epigenetic Dynamics of a Retrotransposon After Allopolyploidization of Wheat

Kraitshtein, Z., Yaakov, B., Khasdan, V., Kashkush, K.

Journal:

Year:

2010

Language:

english

File:

PDF, 2.57 MB

english, 2010

42

Methylation, Transcription, and Rearrangements of Transposable Elements in Synthetic Allopolyploids

Yaakov, Beery, Kashkush, Khalil

Journal:

International Journal of Plant Genomics

Year:

2011

Language:

english

File:

PDF, 436 KB

english, 2011

43

Corrigendum: Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat

Kashkush, Khalil, Feldman, Moshe, Levy, Avraham A.

Journal:

Nature Genetics

Year:

2015

Language:

english

File:

PDF, 98 KB

english, 2015

44

Sequence Elimination and Cytosine Methylation Are Rapid and Reproducible Responses of the Genome to Wide Hybridization and Allopolyploidy in Wheat

Hezi Shaked, Khalil Kashkush, Hakan Ozkan, Moshe Feldman and Avraham A. Levy

Journal:

Year:

2001

Language:

english

File:

PDF, 1.83 MB

english, 2001

45

The Requirement of WHIRLY1 for Embryogenesis Is Dependent on Genetic Background in Maize

Zhang, Ya-Feng, Hou, Ming-Ming, Tan, Bao-Cai, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 12.93 MB

english, 2013

46

Large-Scale Survey of Cytosine Methylation of Retrotransposons and the Impact of Readout Transcription From Long Terminal Repeats on Expression of Adjacent Rice Genes

Kashkush, K., Khasdan, V.

Journal:

Year:

2007

Language:

english

File:

PDF, 633 KB

english, 2007

47

Structure and extent of DNA methylation-based epigenetic variation in wild emmer wheat (T. turgidum ssp. dicoccoides) populations

Venetsky, Anna, Levy-Zamir, Adva, Khasdan, Vadim, Domb, Katherine, Kashkush, Khalil

Journal:

BMC Plant Biology

Year:

2015

Language:

english

File:

PDF, 2.59 MB

english, 2015

48

Flixweed Is More Competitive than Winter Wheat under Ozone Pollution: Evidences from Membrane Lipid Peroxidation, Antioxidant Enzymes and Biomass

Li, Cai-Hong, Wang, Tian-Zuo, Li, Yong, Zheng, Yan-Hai, Jiang, Gao-Ming, Kashkush, Khalil

Journal:

Year:

2013

Language:

english

File:

PDF, 1.47 MB

english, 2013

49

Does the Upstream Region Possessing MULE-Like Sequence in Rice Upregulate PsbS1 Gene Expression?

Nuruzzaman, Mohammed, Kanno, Tatsuo, Amada, Rika, Habu, Yoshiki, Kasajima, Ichiro, Ishikawa, Toshiki, Kawai-Yamada, Maki, Uchimiya, Hirofumi, Kashkush, Khalil

Journal:

Year:

2014

Language:

english

File:

PDF, 3.18 MB

english, 2014

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